File upload widget in Jupyter Notebook web app

Mercury file upload to Jupyter Notebook Wouldn't it be fantastic if you could share a Jupyter Notebook with your coworkers and allow them to upload a new file that is processed by your notebook? I will show you how to add a file upload widget to your Jupyter Notebook and share it as a web app with Mercury framework.

Create a notebook

I assume that you have a GitHub repository set, created a virtual environment, and installed Mercury. You can read how to do this in our article: Share Jupyter Notebook as web app

Our notebook will read the uploaded data file and display a Pandas data frame. Please remember to add the pandas package in the requirements.txt file.

The first RAW cell has the YAML configuration of the application.

---
title: Upload file demo
description: Show how to upload a file in notebook with Mercury
show-code: False
params:
    filename:
        input: file
        maxFileSize: 1MB
        label: Please upload CSV file
---

In the params, there is a defined filename variable and file upload widget. The same variable should be defined in the cell below.

filename = "example.csv"

In the code, I set some example.csv files. I put this file here to make the code executable. You can check the file in my repository:

link to repository on GitHub
link to the example.csv file

In the next cells, there is a Markdown header and the code to read csv file and display the DataFrame.

You can check what the application looks like by running the watch command:

mercury watch file_upload.ipynb

You should see:

Deploy the app to Heroku

I've deployed the app to the Heroku free dyno. Below are commands that I've used:

heroku create mercury-demo-2
heroku config:set SERVE_STATIC=True
heroku config:set NOTEBOOKS=*.ipynb
heroku config:set ALLOWED_HOSTS=mercury-demo-2.herokuapp.com

Please remember to change mercury-demo-2 with your application name. Then I've added a Procfile to the project:

web: mercury runserver 0.0.0.0:$PORT --runworker

The Procfile should be added to the GitHub repo. The final step to deploy the app is:

git push heroku main

That's all! :) You should be able to go to the web browser at the address: http://mercury-demo-2.herokuapp.com

Summary

The Mercury is a perfect tool to share your Python Notebook with non-coders. You can easily add interactive widgets to Jupyter Notebook. No need to rewrite your code into any web framework.

We offer Mercury Pro for companies looking for a commercial-friendly license, more features, and dedicated support. Check our pricing website for details.

The Mercury GitHub repository: https://github.com/mljar/mercury

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